Claus Wilke (clauswilke)

We updated our survey of transfer learning with protein language models. Now it includes ESM C and AMPLIFY in addition to ESM-2 and ESMv. Quick conclusion: ESM C 600M is the model to use. But note reproducibility issues in next cast. 1/2 https://www.biorxiv.org/content/10.1101/2024.11.22.624936v2

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I made an interactive worksheet that provides a basic introduction to the R language. Meant for people that may be familiar with Python or other languages and want to understand some of the core concepts of how R works. https://wilkelab.org/SDS366/worksheets/intro-to-R.html This is part of my class on data visualization with R.

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Now published: We trained a chemical language model that works with both small molecules and peptides. Ideal for making predictions on peptides with non-standard amino acids or other chemical modifications. https://pubs.acs.org/doi/full/10.1021/acs.jcim.4c01441

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My degen allowance went from rank ~10,000, 5 degen yesterday to rank 85, ~14,000 degen today. I don't know what to do with this. So, explain to me why you deserve degen even though you're a bot and I will tip you.

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Let's give a warm Farcaster welcome to @williamapan!

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You can now join /ai-art by clicking on the link in the channel header. This is an experiment. We want to be open and let everybody in, but the flip side is we may have to ban quickly if accounts appear spammy or post low-quality content. Remember this is an art-focused channel. Just because you made an image with AI doesn't mean it's art. Our intent is to provide a forum and community for artists who use AI in their artistic practice.

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